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Browsing Everything (Full)

The following are all of the activities, from all categories and modules, in alphabetical order.

The models are not sequentially numbered; gaps in numbering do not indicate missing models but rather reflect the creation process.

175 activities total. Displaying all.

Activity List

ID Name Editable?
201 A Comparison of Liquid and Gas States Yes
198 Activation Energy [advanced] Yes
239 Active Filters (demo) Yes
272 Air Filtration Yes
206 Alignment of Dipole Moments with/without an External Field Yes
160 Amino Acids and Water: 20 Alanine Model Yes
248 Amplification of Biochemical Signals: the ELISA Test Yes
25 Aquatic Solutions and Our Cells (Five-day unit) No
277 Atomic Layer Deposition No
275 Atomic Mass and Melting Point Yes
47 Atomic Structure (SAM) Yes
310 Atoms and Conservation of Energy (SAM) Yes
63 Attractive Forces and Phase Change: (Atoms in Motion) No
30 BioLogica (Entire module) No
197 Catalysis: Homogeneous Yes
72 Cell Membranes: Diffusion and Osmosis No
43 Charge-Dipole Interaction Yes
24 Chemical Equilibrium (demo) Yes
193 Chemical Equilibrium and Le Chatelier's Principle Yes
192 Chemical Potential Energy and Phase Change Yes
44 Chemical Reaction Kinetics: Dissociation and Recombination of Diatomic Molecules (Demo) Yes
278 Chemical Reactions (advanced unit) Yes
301 Chemical Reactions and Stoichiometry (SAM) Yes
214 Chemical Reactions: 2A to 2A No
216 Chemical Reactions: A2 + B No
215 Chemical Reactions: A2 plus B2 No
259 Chromatography No
241 Counting Reactants and Products Yes
263 Crystals: Closely Packed Metals (3D dynamic) Yes
246 Density and Buoyancy with Centrifugation Yes
181 Density and Buoyancy: How Do Whales Sink So Deep? No
285 Designer Proteins Yes
288 Diffusion Assessment (test) Yes
223 Diffusion, Osmosis, and Dialysis Yes
51 Dihybrid No
186 Dissolving No
55 Dissolving Salt in Water (template model) Yes
237 Dissolving Salt in Water: Teacher-contributed variant Yes
274 Distillation and the Role of Weak Forces Yes
265 DNA Hybridization (Plain Model) Yes
244 DNA Hybridization: Southern Blot Yes
273 DNA to Protein Animation No
245 DNA to Protein Synthesis Yes
315 DNA to Proteins (SAM) Yes
154 Docking: Binding of Complementary Surfaces Yes
299 Drug Design: Protein Kinases No
213 Effect of Charges on Folding: A Strongly Polar Conformation Yes
209 Effect of Charges on Folding: An Alternately Charged Conformation Yes
166 Effusion 2 Yes
59 Elastic Collision between Two Particles Yes
242 Electric and Magnetic Fields (see "Important Notice!") No
318 Electric Current (SAM) Yes
294 Electrical Generators Yes
199 Electrophoresis, with SDS Page No
157 Electrostatic Self-Assembly (demo) Yes
317 Electrostatics (SAM) Yes
316 Energetic States and Photons (SAM) Yes
60 Energy Conservation in Chemical Reactions Yes
293 Energy Games: Energy and Force Among Atoms Yes
21 Experiement on an All-Hydrophilic Polypeptide Yes
54 Exploring Ionic Compounds No
62 Explosion Yes
296 FACS (Fluorescence Activated Cell Sorting) Yes
177 Finding the Nucleus of a Helium Atom (see "Important Notice!") No
256 Fluorescence: Molecular Tagging Yes
66 Formation of Water Shells around Ions Yes
134 Free Radicals: Their Role in Chemical Reactions Yes
97 From Monomers to Polymers (Three-activity module) Yes
28 Gas Diffusion: On Your Marks, Get Set, Go! No
270 Gas Effusion in a Two-Compartment Container Yes
29 Gas Laws: Pressure No
264 Gas Molecules in a Box (3D dynamics) Yes
73 Graphite: Chemical Bond Network Yes
74 Heat and Temperature Yes
238 Heat and Temperature Yes
308 Heat and Temperature (SAM) Yes
292 Heat Flow (Monday's Lesson) Yes
52 Heat of Vaporization (with Latent Heat) Yes
232 Heat Propagation Yes
267 Heat Transfer 2 Yes
313 Hemoglobin (ROVER) Yes
281 Hemoglobin Tour Yes
195 HIV Virus Yes
161 How a Protein Gets Its Shape (older version): The Role of DNA as Code Yes
76 How a Protein Gets Its Shape: The Role of Charge Yes
78 How Do Mass and Inertia Affect Molecular Motion? Yes
212 Hydrophilicity Yes
203 Hydrophobia Yes
152 Introduction to BioLogica No
284 Introduction to Crystals Yes
298 Introduction to Modeling (SAM) Yes
287 Introduction to Molecular Dynamics Models Yes
81 Ion Transport in an Electric Field Yes
204 Ionic Bonds Yes
269 Kinetic Energy Equipartition Yes
170 Latent Heat Yes
283 Light and Matter Interactions (The Activity) Yes
131 Light-Matter Interaction Part I: Photons (Template) Yes
253 Liquid Crystals: LCD Displays No
171 Liquid Crystals: the Mesophase between Solids and Liquids Yes
174 Magnetism: Magnetic levitation of a Charged Particle in a Gravitational Field Yes
176 Mass Effect of Diffusion Yes
85 Mass Spectroscopy No
266 Maxwell Speed and Velocity Distributions Yes
86 Meiosis No
87 Melittin Protein Yes
19 Micelle Dynamics Yes
314 Mission Immunity (Rover) Yes
219 Modeling a Gas: Thermal Equilibrium No
291 Models of the Atom (see "Important Notice!") No
153 Molecular Construction Kit: Joining Molecules Together to Make Macromolecules No
280 Molecular Crystals Yes
262 Molecular Dynamics Simulation of Sodium Chloride (3D) Yes
302 Molecular Geometry: (SAM) Introduction to Molecular Shape Yes
217 Molecular Sieve (demo) Yes
94 Molecules with Aromatic Rings Yes
34 Monohybrid No
150 Mutation Inheritance (BioLogica) No
102 Mutations: Changing the Genetic Code Yes
276 Nanomachines Yes
309 Newton's Laws at the Atomic Level (SAM) Yes
312 NSTA 2008: Creating learning activities using the Molecular Workbench No
106 Observing Newton's 3rd Law in Molecular Dynamics Simulation Yes
233 Osmosis No
23 Osmosis and Osmotic Pressure: Simple Model Yes
180 Phase Change No
305 Phase Change (SAM) Yes
178 Phase Separation Yes
279 Piezoelectric Effect Yes
187 Point Defects in Crystals Yes
282 Polymerization Yes
163 Polymerization: Step Growth (model only) Yes
108 Potential Energy Curves and Activation Energy Yes
110 Potential Energy in Covalent Bond Formation Yes
169 Pressure Equilibrium (A piston) No
300 Protein Conservation: an View into Proteomics Yes
225 Protein Folding (Stepping Stones-Full Activity) Yes
207 Protein folding starting from a random coil: a long polypeptide Yes
156 Protein Substrate Docking Yes
261 Protein Synthesis Core Model Yes
56 Reaction Rate and Concentration Yes
58 Reaction Rate and Temperature Yes
247 Reaction Rates, Catalysis, and Pasteurization Yes
113 Reversibility of Chemical Reactions Yes
115 Self-alignment of dipole moments and alignment in external field Yes
155 Self-Assembly (Demo model) Yes
295 Self-Assembly 2: Complementarity No
231 Self-Assembly with Nanomanufacturing Yes
158 Simulating Primitive Life: Nanoworms Yes
188 Solids, Liquids, and Gases No
210 Solvation of Polar Molecules Yes
220 Spatial Equilibrium: Modeling a Gas No
304 Spectroscopy (SAM) Yes
127 States of Matter (week-long unit) No
144 States of Matter Basics: Interatomic interactions: Towards state of matter (I) and (II) Yes
146 States of Matter Basics: Comparison of liquid and solid Yes
235 Strong Chemical Bonds (SAM) Yes
236 Structure of Proteins: Insulin Yes
130 Superballs are Like Atoms Yes
260 Template-Based Synthesis: PCR No
289 Testing Basic Molecular Ideas No
132 The Effect of Structures and Subforces on Protein Conformation Yes
172 The Relationship Between Interaction Strength and Melting Point Yes
226 The Tree of Life's Macromolecules Yes
40 Thermal (Brownian) Motion: Atoms and Molecules Are Always Moving Yes
196 Tobacco Mosaic Virus Yes
139 Two Atoms in a Box (collisions and transfer of energy) No
227 Van der Waals Attractions (SAM) Yes
290 Visualizing Beginning Molecular Ideas (a TEST) Yes
211 Water as mediators of proteins in cells Yes
202 Water Molecules Yes
140 Water: Getting to Know the Water Molecule No
143 X-Linkage No
271 X-ray Crystallography Yes
311 Zoom It - A Sense of Scale Yes


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These materials are based upon work supported
by the National Science Foundation under grant numbers
9980620, ESI-0242701 and EIA-0219345

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